Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| azld domain-containing protein | AMED_RS26910 | Not Available | Negative | 5881760 - 5882080 | 10654.6 |
| azlc family abc transporter permease | AMED_RS26915 | Not Available | Negative | 5882080 - 5882772 | 23952.7 |
| helix-turn-helix domain-containing protein | AMED_RS26920 | Not Available | Positive | 5882841 - 5883404 | 20051.0 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS26925 | Not Available | Positive | 5883578 - 5884768 | 42561.6 |
| acyl-coa dehydrogenase family protein | AMED_RS26930 | Not Available | Positive | 5884785 - 5885945 | 41874.7 |
| amino acid adenylation domain-containing protein | AMED_RS26935 | Not Available | Negative | 5885997 - 5888264 | 80241.9 |
| acyl carrier protein | AMED_RS26940 | Not Available | Negative | 5888274 - 5888558 | 10266.1 |
| thioesterase ii family protein | AMED_RS26945 | Not Available | Negative | 5888606 - 5889370 | 26998.9 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | AMED_RS26950 | Not Available | Negative | 5889591 - 5890514 | 32587.2 |
| duf5937 family protein | AMED_RS26955 | Not Available | Negative | 5890603 - 5891586 | 35405.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
