Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS26810 | Not Available | Positive | 5863952 - 5864530 | 21451.8 |
| enoyl-coa hydratase/isomerase family protein | AMED_RS26815 | Not Available | Negative | 5864517 - 5865296 | 27788.1 |
| alpha/beta fold hydrolase | AMED_RS26820 | Not Available | Positive | 5865368 - 5866201 | 30009.7 |
| response regulator transcription factor | AMED_RS26825 | Not Available | Negative | 5866212 - 5867234 | 36316.4 |
| cupin domain-containing protein | AMED_RS26830 | Not Available | Positive | 5867322 - 5867735 | 14432.0 |
| duf1304 domain-containing protein | AMED_RS26835 | Not Available | Positive | 5867732 - 5868133 | 13888.4 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS26840 | Not Available | Negative | 5868130 - 5868567 | 16396.7 |
| amidohydrolase family protein | AMED_RS26845 | Not Available | Positive | 5868620 - 5869909 | 44741.3 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | AMED_RS26850 | Not Available | Negative | 5869885 - 5872239 | 86393.7 |
| adenine phosphoribosyltransferase | AMED_RS26855 | Not Available | Negative | 5872428 - 5872946 | 17472.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
