Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spw repeat protein | AMED_RS26760 | Not Available | Negative | 5852647 - 5853027 | 12694.0 |
| hypothetical protein | AMED_RS26765 | Not Available | Negative | 5853118 - 5853627 | 17522.2 |
| btad domain-containing putative transcriptional regulator | AMED_RS26770 | Not Available | Negative | 5853729 - 5856683 | 104839.0 |
| dj-1/pfpi family protein | AMED_RS26775 | Not Available | Negative | 5856789 - 5857508 | 25357.6 |
| glxa family transcriptional regulator | AMED_RS26780 | Not Available | Positive | 5857608 - 5858585 | 34897.5 |
| yibe/f family protein | AMED_RS26785 | Not Available | Positive | 5858757 - 5860442 | 57394.2 |
| hypothetical protein | AMED_RS26790 | Not Available | Negative | 5860444 - 5861073 | 22324.7 |
| mbl fold metallo-hydrolase | AMED_RS26795 | Not Available | Negative | 5861070 - 5861642 | 18644.1 |
| peptidylprolyl isomerase | AMED_RS26800 | Not Available | Positive | 5861791 - 5862666 | 30383.2 |
| lysm peptidoglycan-binding domain-containing protein | AMED_RS26805 | Not Available | Positive | 5863029 - 5863856 | 28712.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
