Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis ccda family protein | AMED_RS02585 | Not Available | Positive | 499402 - 500175 | 26935.7 |
| cytochrome c biogenesis protein resb | AMED_RS02590 | Not Available | Positive | 500172 - 501767 | 58677.1 |
| c-type cytochrome biogenesis protein ccsb | AMED_RS02595 | Not Available | Positive | 501771 - 502739 | 35141.4 |
| mind/para family protein | AMED_RS02600 | Not Available | Positive | 502815 - 504152 | 47393.5 |
| hypothetical protein | AMED_RS02605 | Not Available | Negative | 504269 - 504454 | 6795.28 |
| bldc family transcriptional regulator | AMED_RS02610 | Not Available | Negative | 504601 - 504813 | 7566.02 |
| lrp/asnc family transcriptional regulator | AMED_RS02615 | Not Available | Positive | 505090 - 505563 | 16512.5 |
| duf4229 domain-containing protein | AMED_RS02620 | Not Available | Positive | 505575 - 505856 | 10089.8 |
| plp-dependent cysteine synthase family protein | AMED_RS02625 | Not Available | Positive | 505853 - 506935 | 39958.1 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | AMED_RS02630 | Not Available | Negative | 506932 - 507804 | 30060.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
