Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ku protein | AMED_RS26710 | Not Available | Negative | 5841567 - 5842433 | 32124.3 |
| styrene monooxygenase/indole monooxygenase family protein | AMED_RS26715 | Not Available | Negative | 5842509 - 5843735 | 45001.7 |
| atp/gtp-binding protein | AMED_RS26720 | Not Available | Negative | 5843774 - 5844400 | 21819.8 |
| duf742 domain-containing protein | AMED_RS26725 | Not Available | Negative | 5844375 - 5844758 | 13916.9 |
| roadblock/lc7 domain-containing protein | AMED_RS26730 | Not Available | Negative | 5844965 - 5845402 | 15271.5 |
| atp-binding protein | AMED_RS26735 | Not Available | Negative | 5845399 - 5846715 | 45820.2 |
| tetr/acrr family transcriptional regulator | AMED_RS26740 | Not Available | Positive | 5847059 - 5847721 | 24556.6 |
| abc transporter atp-binding protein | AMED_RS26745 | Not Available | Positive | 5847715 - 5849448 | 62794.8 |
| abc transporter atp-binding protein | AMED_RS26750 | Not Available | Positive | 5849522 - 5851534 | 72534.8 |
| dna polymerase ligase n-terminal domain-containing protein | AMED_RS26755 | Not Available | Positive | 5851590 - 5852657 | 39717.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
