Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | AMED_RS26610 | Not Available | Negative | 5817219 - 5817974 | 24961.5 |
| dihydrofolate reductase family protein | AMED_RS26615 | Not Available | Positive | 5818065 - 5818649 | 21122.1 |
| discoidin domain-containing protein | AMED_RS26620 | Not Available | Positive | 5818771 - 5821800 | 107103.0 |
| laci family dna-binding transcriptional regulator | AMED_RS26625 | Not Available | Positive | 5821883 - 5822929 | 36433.6 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | AMED_RS26630 | Not Available | Negative | 5822872 - 5825805 | 100770.0 |
| discoidin domain-containing protein | AMED_RS26635 | Not Available | Negative | 5825802 - 5827508 | 60321.9 |
| discoidin domain-containing protein | AMED_RS26640 | Not Available | Positive | 5827987 - 5830200 | 77263.4 |
| fad-dependent monooxygenase | AMED_RS26645 | Not Available | Negative | 5830102 - 5831637 | 55568.2 |
| mbl fold metallo-hydrolase | AMED_RS26650 | Not Available | Negative | 5831634 - 5832596 | 35081.1 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS26655 | Not Available | Positive | 5832692 - 5833222 | 19329.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
