Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS26565 | Not Available | Negative | 5806690 - 5808753 | 66598.2 |
| hypothetical protein | AMED_RS26570 | Not Available | Negative | 5808762 - 5809229 | 16665.6 |
| esx secretion-associated protein espg | AMED_RS26575 | Not Available | Negative | 5809249 - 5810091 | 29807.5 |
| hnh endonuclease signature motif containing protein | AMED_RS26580 | Not Available | Negative | 5810781 - 5812010 | 44210.1 |
| transposase | AMED_RS49685 | Not Available | Negative | 5812066 - 5812659 | 22172.8 |
| hypothetical protein | AMED_RS48035 | Not Available | Negative | 5812638 - 5812787 | 5154.16 |
| flavin reductase family protein | AMED_RS26590 | Not Available | Negative | 5812884 - 5813495 | 22087.6 |
| xanthine dehydrogenase family protein subunit m | AMED_RS26595 | Not Available | Negative | 5813649 - 5814461 | 28521.2 |
| (2fe-2s)-binding protein | AMED_RS26600 | Not Available | Negative | 5814458 - 5814928 | 16403.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | AMED_RS26605 | Not Available | Negative | 5814925 - 5817189 | 78881.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
