Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 39 protein | AMED_RS26515 | Not Available | Positive | 5792562 - 5794055 | 52557.7 |
| alpha-l-fucosidase | AMED_RS26520 | Not Available | Negative | 5794096 - 5796447 | 84321.9 |
| hypothetical protein | AMED_RS26525 | Not Available | Positive | 5796686 - 5796952 | 9199.96 |
| sgnh/gdsl hydrolase family protein | AMED_RS26530 | Not Available | Positive | 5797374 - 5798609 | 42889.2 |
| mfs transporter | AMED_RS26535 | Not Available | Negative | 5798567 - 5799874 | 46202.2 |
| gnat family n-acetyltransferase | AMED_RS26540 | Not Available | Negative | 5799871 - 5800413 | 19630.0 |
| radical sam protein | AMED_RS26545 | Not Available | Negative | 5800466 - 5800942 | 16363.0 |
| rhs repeat-associated core domain-containing protein | AMED_RS26550 | Not Available | Negative | 5800946 - 5805805 | 172788.0 |
| ybab/ebfc family nucleoid-associated protein | AMED_RS26555 | Not Available | Negative | 5805799 - 5806344 | 19320.2 |
| type vii secretion target | AMED_RS26560 | Not Available | Negative | 5806341 - 5806685 | 12035.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
