Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS26415 | Not Available | Positive | 5777970 - 5778182 | 7445.85 |
| gaf and antar domain-containing protein | AMED_RS26420 | Not Available | Negative | 5778225 - 5778953 | 26030.1 |
| stas domain-containing protein | AMED_RS26425 | Not Available | Positive | 5779247 - 5779612 | 12734.5 |
| tigr03557 family f420-dependent llm class oxidoreductase | AMED_RS26430 | Not Available | Negative | 5779643 - 5780608 | 34802.1 |
| hypothetical protein | AMED_RS26435 | Not Available | Positive | 5780852 - 5781181 | 12214.3 |
| atp-binding protein | AMED_RS26440 | Not Available | Positive | 5781244 - 5781693 | 15876.0 |
| sigb/sigf/sigg family rna polymerase sigma factor | AMED_RS26445 | Not Available | Positive | 5781690 - 5782481 | 29439.3 |
| cyth and chad domain-containing protein | AMED_RS26450 | Not Available | Negative | 5782513 - 5784030 | 55911.1 |
| hemerythrin domain-containing protein | AMED_RS26455 | Not Available | Positive | 5784155 - 5784676 | 18910.2 |
| gaf and antar domain-containing protein | AMED_RS26460 | Not Available | Positive | 5784718 - 5785518 | 28250.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
