Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| age family epimerase/isomerase | AMED_RS26315 | Not Available | Negative | 5753253 - 5754446 | 43151.7 |
| lytic polysaccharide monooxygenase | AMED_RS26320 | Not Available | Positive | 5754615 - 5755739 | 39140.4 |
| laci family dna-binding transcriptional regulator | AMED_RS26325 | Not Available | Negative | 5755815 - 5756765 | 32509.4 |
| abc transporter substrate-binding protein | AMED_RS26330 | Not Available | Positive | 5756993 - 5758264 | 45721.1 |
| glycoside hydrolase family 6 protein | AMED_RS26335 | Not Available | Negative | 5758681 - 5760501 | 63190.1 |
| cellulase family glycosylhydrolase | AMED_RS26340 | Not Available | Negative | 5760536 - 5762065 | 53346.4 |
| glycoside hydrolase family 48 protein | AMED_RS26345 | Not Available | Negative | 5762076 - 5764994 | 102784.0 |
| laci family dna-binding transcriptional regulator | AMED_RS26350 | Not Available | Negative | 5765506 - 5766501 | 35373.3 |
| abc transporter substrate-binding protein | AMED_RS26355 | Not Available | Positive | 5766751 - 5768055 | 46497.6 |
| carbohydrate abc transporter permease | AMED_RS26360 | Not Available | Positive | 5768060 - 5769049 | 36283.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
