Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS02535 | Not Available | Positive | 491276 - 491722 | 15822.1 |
| hypothetical protein | AMED_RS02540 | Not Available | Positive | 491736 - 492074 | 11879.5 |
| efflux rnd transporter periplasmic adaptor subunit | AMED_RS02545 | Not Available | Positive | 492137 - 493453 | 42423.8 |
| abc transporter atp-binding protein | AMED_RS02550 | Not Available | Positive | 493450 - 494154 | 25178.6 |
| abc transporter permease | AMED_RS02555 | Not Available | Positive | 494151 - 495353 | 40674.4 |
| hypothetical protein | AMED_RS02560 | Not Available | Positive | 495365 - 495952 | 19059.1 |
| tspo/mbr family protein | AMED_RS02565 | Not Available | Negative | 495961 - 496437 | 16914.9 |
| glutamate-1-semialdehyde 2,1-aminomutase | AMED_RS02570 | Not Available | Positive | 496498 - 497799 | 44590.8 |
| histidine phosphatase family protein | AMED_RS02575 | Not Available | Positive | 497796 - 498422 | 23065.5 |
| tlpa disulfide reductase family protein | AMED_RS02580 | Not Available | Positive | 498419 - 498985 | 20212.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
