Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate--coa ligase family protein | AMED_RS26165 | Not Available | Positive | 5713628 - 5715073 | 52758.0 |
| hypothetical protein | AMED_RS26170 | Not Available | Negative | 5715070 - 5717643 | 97594.1 |
| duf4326 domain-containing protein | AMED_RS26175 | Not Available | Negative | 5717690 - 5717998 | 11243.5 |
| stas domain-containing protein | AMED_RS26180 | Not Available | Positive | 5718254 - 5718643 | 13777.6 |
| response regulator transcription factor | AMED_RS26185 | Not Available | Negative | 5718648 - 5719028 | 13020.7 |
| pas domain s-box protein | AMED_RS26190 | Not Available | Negative | 5719025 - 5720446 | 52344.9 |
| atp-binding protein | AMED_RS26195 | Not Available | Negative | 5720498 - 5720896 | 13643.5 |
| response regulator transcription factor | AMED_RS26200 | Not Available | Negative | 5720968 - 5721615 | 22299.9 |
| duf6292 family protein | AMED_RS26205 | Not Available | Negative | 5721683 - 5722147 | 16413.7 |
| rraa family protein | AMED_RS26210 | Not Available | Negative | 5722215 - 5722916 | 24439.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
