Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdar family transcriptional regulator | AMED_RS26010 | Not Available | Negative | 5685033 - 5686298 | 45895.0 |
| alpha/beta fold hydrolase | AMED_RS26015 | Not Available | Negative | 5686328 - 5686990 | 23176.7 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS26020 | Not Available | Negative | 5687005 - 5688120 | 38258.4 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | AMED_RS26025 | Not Available | Negative | 5688117 - 5688806 | 24549.3 |
| doxx family protein | AMED_RS26030 | Not Available | Positive | 5689235 - 5689669 | 15243.8 |
| voc family protein | AMED_RS26035 | Not Available | Negative | 5689666 - 5690184 | 18399.5 |
| hypothetical protein | AMED_RS26040 | Not Available | Negative | 5690253 - 5690546 | 10941.0 |
| d-ala-d-ala carboxypeptidase family metallohydrolase | AMED_RS26045 | Not Available | Negative | 5690812 - 5690979 | 5648.87 |
| alpha/beta fold hydrolase | AMED_RS26050 | Not Available | Positive | 5691124 - 5691993 | 31587.7 |
| tetr/acrr family transcriptional regulator | AMED_RS26055 | Not Available | Positive | 5691998 - 5692588 | 21162.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
