Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-sec(p) | Not Available | Not Available | Positive | 5678899 - 5678989 | Not Available |
| selenide, water dikinase seld | AMED_RS25965 | Not Available | Positive | 5679044 - 5680036 | 33863.4 |
| duf2795 domain-containing protein | AMED_RS25970 | Not Available | Positive | 5680095 - 5680307 | 7331.34 |
| hypothetical protein | AMED_RS25975 | Not Available | Negative | 5680311 - 5680601 | 10605.0 |
| cysteine hydrolase family protein | AMED_RS25980 | Not Available | Positive | 5680655 - 5681221 | 20238.8 |
| serine hydrolase | AMED_RS25985 | Not Available | Negative | 5681238 - 5682137 | 31760.3 |
| lysr family transcriptional regulator | AMED_RS25990 | Not Available | Negative | 5682134 - 5683003 | 30824.1 |
| class a beta-lactamase | AMED_RS25995 | Not Available | Positive | 5683129 - 5684028 | 31356.2 |
| nad(p)h-dependent oxidoreductase | AMED_RS26000 | Not Available | Negative | 5684025 - 5684648 | 22821.3 |
| hypothetical protein | AMED_RS26005 | Not Available | Negative | 5684698 - 5684946 | 8357.36 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
