Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1996 domain-containing protein | AMED_RS25765 | Not Available | Positive | 5635945 - 5636715 | 27228.7 |
| hypothetical protein | AMED_RS25770 | Not Available | Positive | 5636830 - 5637372 | 18895.8 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS25775 | Not Available | Negative | 5637411 - 5637866 | 16559.7 |
| alpha/beta fold hydrolase | AMED_RS25780 | Not Available | Positive | 5637962 - 5638831 | 30908.6 |
| mfs transporter | AMED_RS25785 | Not Available | Negative | 5638876 - 5640495 | 54669.1 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS25790 | Not Available | Negative | 5640606 - 5641148 | 19987.2 |
| mip/aquaporin family protein | AMED_RS25795 | Not Available | Negative | 5641443 - 5642159 | 23489.8 |
| hypothetical protein | AMED_RS25800 | Not Available | Negative | 5642313 - 5642930 | 21930.8 |
| thiamine pyrophosphate-binding protein | AMED_RS25805 | Not Available | Positive | 5643015 - 5644940 | 67019.3 |
| s9 family peptidase | AMED_RS25810 | Not Available | Negative | 5644989 - 5646119 | 41804.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
