Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin family protein | AMED_RS02485 | Not Available | Positive | 480812 - 481048 | 8810.32 |
| molybdopterin-dependent oxidoreductase | AMED_RS02490 | Not Available | Positive | 481124 - 482680 | 55105.2 |
| redox-sensing transcriptional repressor rex | AMED_RS02495 | Not Available | Positive | 483042 - 483965 | 31735.0 |
| glutamyl-trna reductase | AMED_RS02500 | Not Available | Positive | 484039 - 485346 | 45968.1 |
| hydroxymethylbilane synthase | AMED_RS02505 | Not Available | Positive | 485367 - 486296 | 31710.2 |
| bifunctional uroporphyrinogen-iii c-methyltransferase/uroporphyrinogen-iii synthase | AMED_RS02510 | Not Available | Positive | 486415 - 487947 | 53491.8 |
| nad(p)-dependent oxidoreductase | AMED_RS02515 | Not Available | Negative | 488000 - 488872 | 30955.9 |
| arac family transcriptional regulator | AMED_RS02520 | Not Available | Negative | 488869 - 489666 | 28377.4 |
| porphobilinogen synthase | AMED_RS02525 | Not Available | Positive | 489754 - 490725 | 34750.6 |
| hypothetical protein | AMED_RS02530 | Not Available | Positive | 490743 - 491279 | 19519.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
