Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | AMED_RS02385 | Not Available | Positive | 461298 - 462167 | 30858.5 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS02390 | Not Available | Positive | 462313 - 463554 | 44173.7 |
| response regulator transcription factor | AMED_RS02395 | Not Available | Positive | 463551 - 464240 | 25110.4 |
| ppx/gppa phosphatase family protein | AMED_RS02400 | Not Available | Positive | 464364 - 465347 | 35117.0 |
| hypothetical protein | AMED_RS02405 | Not Available | Negative | 465499 - 465672 | 5617.81 |
| hypothetical protein | AMED_RS02410 | Not Available | Positive | 465822 - 467189 | 48474.8 |
| sugar phosphate isomerase/epimerase | AMED_RS02415 | Not Available | Positive | 467266 - 468078 | 29335.1 |
| thioesterase family protein | AMED_RS02420 | Not Available | Positive | 468211 - 469029 | 29273.2 |
| pyrroline-5-carboxylate reductase | AMED_RS02425 | Not Available | Positive | 469223 - 470035 | 28317.3 |
| helix-turn-helix domain-containing protein | AMED_RS02430 | Not Available | Positive | 470229 - 470444 | 7893.64 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
