Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMED_RS00155 | Not Available | Negative | 34727 - 36124 | 48465.6 |
| pyridoxal 5'-phosphate synthase | AMED_RS00160 | Not Available | Negative | 36180 - 36818 | 23502.5 |
| hypothetical protein | AMED_RS00165 | Not Available | Negative | 36820 - 37470 | 22563.9 |
| metal-dependent hydrolase | AMED_RS00170 | Not Available | Positive | 37553 - 38084 | 18559.0 |
| duf6918 family protein | AMED_RS00175 | Not Available | Positive | 38231 - 38683 | 15958.9 |
| hypothetical protein | AMED_RS00180 | Not Available | Negative | 38752 - 39288 | 18909.0 |
| peptidylprolyl isomerase | AMED_RS00185 | Not Available | Positive | 39378 - 39902 | 18666.8 |
| rhomboid family intramembrane serine protease | AMED_RS00190 | Not Available | Positive | 40093 - 40893 | 28506.0 |
| ph domain-containing protein | AMED_RS00195 | Not Available | Negative | 40890 - 41303 | 14789.7 |
| cell division protein crga | AMED_RS00200 | Not Available | Negative | 41374 - 41640 | 9837.51 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
