Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS02335 | Not Available | Negative | 451938 - 452738 | 28846.3 |
| duf2505 domain-containing protein | AMED_RS02340 | Not Available | Negative | 452717 - 453223 | 18032.3 |
| udp-n-acetylmuramate dehydrogenase | AMED_RS02345 | Not Available | Positive | 453248 - 454303 | 36880.8 |
| ig-like domain-containing protein | AMED_RS02350 | Not Available | Positive | 454462 - 455643 | 41781.9 |
| alpha/beta fold hydrolase | AMED_RS02355 | Not Available | Positive | 455647 - 456462 | 28428.9 |
| d-inositol-3-phosphate glycosyltransferase | AMED_RS02360 | Not Available | Positive | 456560 - 457855 | 45654.6 |
| ybjn domain-containing protein | AMED_RS02365 | Not Available | Positive | 457852 - 458364 | 19037.4 |
| duf4349 domain-containing protein | AMED_RS02370 | Not Available | Positive | 458434 - 459303 | 29832.7 |
| phosphoglyceromutase | AMED_RS02375 | Not Available | Positive | 459790 - 460539 | 27394.3 |
| response regulator transcription factor | AMED_RS02380 | Not Available | Negative | 460592 - 461230 | 23264.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
