Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | AMED_RS02285 | Not Available | Negative | 444409 - 445188 | 28029.2 |
| marr family transcriptional regulator | AMED_RS02290 | Not Available | Negative | 445218 - 445688 | 16803.2 |
| srpbcc family protein | AMED_RS02295 | Not Available | Positive | 445802 - 446236 | 15432.3 |
| nadp-dependent oxidoreductase | AMED_RS02300 | Not Available | Positive | 446331 - 447338 | 35434.5 |
| had family hydrolase | AMED_RS02305 | Not Available | Negative | 447335 - 447958 | 21640.0 |
| tetr/acrr family transcriptional regulator | AMED_RS02310 | Not Available | Negative | 447991 - 448602 | 22069.4 |
| nad(p)-dependent alcohol dehydrogenase | AMED_RS02315 | Not Available | Positive | 448699 - 449748 | 36804.1 |
| formyltetrahydrofolate deformylase | AMED_RS02320 | Not Available | Negative | 449769 - 450635 | 31766.9 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS02325 | Not Available | Negative | 450659 - 451276 | 22288.2 |
| deda family protein | AMED_RS02330 | Not Available | Negative | 451173 - 451874 | 24356.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
