Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybak/ebsc family protein | AMED_RS02235 | Not Available | Positive | 436351 - 436893 | 18416.3 |
| ornithine cyclodeaminase family protein | AMED_RS02240 | Not Available | Positive | 436890 - 437897 | 36428.5 |
| aromatic amino acid lyase | AMED_RS02245 | Not Available | Positive | 437894 - 439342 | 50974.4 |
| hypothetical protein | AMED_RS02250 | Not Available | Negative | 439862 - 440074 | 7612.0 |
| hypothetical protein | AMED_RS02255 | Not Available | Negative | 440111 - 440305 | 6889.14 |
| cadmium resistance transporter | AMED_RS02260 | Not Available | Positive | 440367 - 440930 | 18913.6 |
| m15 family metallopeptidase | AMED_RS02265 | Not Available | Positive | 441066 - 441758 | 24618.9 |
| abc transporter permease | AMED_RS02270 | Not Available | Negative | 441942 - 442652 | 25424.2 |
| abc transporter permease | AMED_RS02275 | Not Available | Negative | 442649 - 443347 | 24703.1 |
| abc transporter substrate-binding protein | AMED_RS02280 | Not Available | Positive | 443487 - 444407 | 32540.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
