Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | AMED_RS02185 | Not Available | Negative | 428723 - 429889 | 41689.0 |
| duf445 domain-containing protein | AMED_RS02190 | Not Available | Positive | 429919 - 431217 | 47765.6 |
| cgnr zinc finger domain-containing protein | AMED_RS02195 | Not Available | Negative | 431431 - 431892 | 16621.6 |
| voc family protein | AMED_RS02200 | Not Available | Positive | 431976 - 432344 | 13104.5 |
| zf-tfiib domain-containing protein | AMED_RS02205 | Not Available | Positive | 432352 - 432714 | 13509.8 |
| nucleoside kinase | AMED_RS02210 | Not Available | Positive | 432716 - 433327 | 22550.2 |
| methyltransferase domain-containing protein | AMED_RS02215 | Not Available | Negative | 433324 - 434505 | 42552.8 |
| helix-turn-helix domain-containing protein | AMED_RS02220 | Not Available | Positive | 434653 - 435072 | 14970.7 |
| membrane protein | AMED_RS02225 | Not Available | Positive | 435069 - 435758 | 24537.0 |
| duf2516 family protein | AMED_RS02230 | Not Available | Positive | 435843 - 436136 | 10586.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
