Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | AMED_RS02135 | Not Available | Negative | 418241 - 419617 | 47550.7 |
| dihydrofolate reductase family protein | AMED_RS02140 | Not Available | Positive | 419744 - 420301 | 19618.6 |
| d-cysteine desulfhydrase family protein | AMED_RS02145 | Not Available | Positive | 420330 - 421358 | 35615.5 |
| metal-dependent hydrolase | AMED_RS02150 | Not Available | Negative | 421437 - 422003 | 19887.6 |
| protein phosphatase 2c domain-containing protein | AMED_RS02155 | Not Available | Negative | 422038 - 422823 | 28213.0 |
| sigma factor-like helix-turn-helix dna-binding protein | AMED_RS02160 | Not Available | Positive | 422915 - 423124 | 7716.24 |
| clp protease n-terminal domain-containing protein | AMED_RS02165 | Not Available | Positive | 423124 - 423651 | 18916.6 |
| yitt family protein | AMED_RS02170 | Not Available | Negative | 423648 - 424289 | 22373.8 |
| plp-dependent aminotransferase family protein | AMED_RS02175 | Not Available | Positive | 424351 - 425799 | 51070.3 |
| hypothetical protein | AMED_RS02180 | Not Available | Negative | 426311 - 427972 | 53799.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
