Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4142 domain-containing protein | AMED_RS21945 | Not Available | Positive | 4724197 - 4724904 | 24633.4 |
| sigma-54-dependent fis family transcriptional regulator | AMED_RS21950 | Not Available | Negative | 4725009 - 4726793 | 65366.0 |
| hypothetical protein | AMED_RS21955 | Not Available | Positive | 4726931 - 4727170 | 8293.85 |
| methane monooxygenase | AMED_RS21960 | Not Available | Positive | 4727276 - 4728925 | 64273.7 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | AMED_RS21965 | Not Available | Positive | 4728942 - 4729970 | 37899.0 |
| toluene hydroxylase | AMED_RS21970 | Not Available | Positive | 4729979 - 4731148 | 44240.5 |
| propane 2-monooxygenase effector subunit mimd | AMED_RS21975 | Not Available | Positive | 4731145 - 4731516 | 13651.0 |
| amidohydrolase family protein | AMED_RS21980 | Not Available | Positive | 4731552 - 4732589 | 39552.6 |
| iron-sulfur cluster assembly protein | AMED_RS21985 | Not Available | Positive | 4732586 - 4733284 | 24780.5 |
| nad(p)-dependent alcohol dehydrogenase | AMED_RS21990 | Not Available | Positive | 4733281 - 4734306 | 35878.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
