Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf47 domain-containing protein | AMED_RS21750 | Not Available | Positive | 4682761 - 4683375 | 22478.8 |
| inorganic phosphate transporter | AMED_RS21755 | Not Available | Positive | 4683376 - 4684371 | 33948.1 |
| zinc-dependent alcohol dehydrogenase | AMED_RS21760 | Not Available | Positive | 4684435 - 4685625 | 42811.6 |
| coce/nond family hydrolase | AMED_RS21765 | Not Available | Positive | 4685645 - 4687669 | 75298.5 |
| nad-dependent epimerase/dehydratase family protein | AMED_RS21770 | Not Available | Positive | 4687704 - 4688777 | 37431.8 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS21775 | Not Available | Positive | 4688795 - 4690387 | 55926.7 |
| srpbcc family protein | AMED_RS21780 | Not Available | Negative | 4690794 - 4691261 | 16423.7 |
| yihy/virulence factor brkb family protein | AMED_RS21785 | Not Available | Positive | 4691316 - 4692329 | 35877.0 |
| voc family protein | AMED_RS21790 | Not Available | Positive | 4692334 - 4692714 | 13559.1 |
| hypothetical protein | AMED_RS21795 | Not Available | Negative | 4692762 - 4693091 | 12286.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
