Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS02085 | Not Available | Negative | 410847 - 411011 | 5605.6 |
| duf397 domain-containing protein | AMED_RS02090 | Not Available | Positive | 411313 - 411567 | 9009.39 |
| hypothetical protein | AMED_RS02095 | Not Available | Negative | 411679 - 412224 | 19289.7 |
| hypothetical protein | AMED_RS02100 | Not Available | Negative | 412217 - 413359 | 39574.7 |
| fixh family protein | AMED_RS02105 | Not Available | Negative | 413371 - 413763 | 13122.1 |
| hypothetical protein | AMED_RS02110 | Not Available | Negative | 413760 - 415157 | 47484.0 |
| alpha/beta fold hydrolase | AMED_RS02115 | Not Available | Negative | 415253 - 416104 | 31770.6 |
| abate domain-containing protein | AMED_RS02120 | Not Available | Positive | 416150 - 416710 | 19814.8 |
| oxygenase mpab family protein | AMED_RS02125 | Not Available | Negative | 416833 - 417699 | 32593.3 |
| tetr/acrr family transcriptional regulator | AMED_RS02130 | Not Available | Negative | 417699 - 418274 | 20118.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
