Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | AMED_RS21650 | Not Available | Negative | 4662722 - 4663546 | 27880.9 |
| duf2795 domain-containing protein | AMED_RS21655 | Not Available | Positive | 4663666 - 4663854 | 6619.75 |
| glycosyltransferase family 9 protein | AMED_RS21660 | Not Available | Negative | 4663909 - 4664952 | 35679.0 |
| had-iiia family hydrolase | AMED_RS21665 | Not Available | Negative | 4664949 - 4666427 | 52311.8 |
| aldehyde dehydrogenase | AMED_RS21670 | Not Available | Positive | 4666518 - 4667867 | 45978.5 |
| aromatic acid exporter family protein | AMED_RS21675 | Not Available | Positive | 4668056 - 4669195 | 41126.0 |
| hypothetical protein | AMED_RS21680 | Not Available | Negative | 4669236 - 4669415 | 6353.75 |
| flavodoxin family protein | AMED_RS21685 | Not Available | Negative | 4669513 - 4670118 | 21539.5 |
| udp-glucose/gdp-mannose dehydrogenase family protein | AMED_RS21690 | Not Available | Negative | 4670115 - 4671425 | 45341.2 |
| glycosyltransferase family 9 protein | AMED_RS21695 | Not Available | Negative | 4671418 - 4672368 | 32907.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
