Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance d family protein | AMED_RS21600 | Not Available | Negative | 4656231 - 4657139 | 31755.3 |
| hypothetical protein | AMED_RS21605 | Not Available | Negative | 4657144 - 4657764 | 19619.8 |
| copper resistance copc family protein | AMED_RS21610 | Not Available | Positive | 4658148 - 4658684 | 17793.1 |
| duf6221 family protein | AMED_RS21615 | Not Available | Positive | 4658714 - 4659052 | 12877.0 |
| phosphoribosyltransferase | AMED_RS21620 | Not Available | Positive | 4659057 - 4659707 | 22977.5 |
| duf6292 family protein | AMED_RS21625 | Not Available | Positive | 4659828 - 4660250 | 15105.6 |
| merr family transcriptional regulator | AMED_RS21630 | Not Available | Negative | 4660220 - 4661200 | 36018.7 |
| voc family protein | AMED_RS21635 | Not Available | Negative | 4661246 - 4661608 | 13122.7 |
| hypothetical protein | AMED_RS21640 | Not Available | Negative | 4661605 - 4662018 | 14870.0 |
| duf4383 domain-containing protein | AMED_RS21645 | Not Available | Negative | 4662125 - 4662568 | 15538.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
