Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii truncated hemoglobin | AMED_RS21400 | Not Available | Negative | 4618613 - 4619068 | 16675.7 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS21405 | Not Available | Negative | 4619109 - 4620050 | 33153.3 |
| helix-turn-helix domain-containing protein | AMED_RS21410 | Not Available | Positive | 4620128 - 4620721 | 21721.3 |
| gnat family n-acetyltransferase | AMED_RS21415 | Not Available | Negative | 4620931 - 4621419 | 17451.7 |
| helix-turn-helix domain-containing protein | AMED_RS21420 | Not Available | Positive | 4621438 - 4622028 | 20866.1 |
| elongation factor tu | AMED_RS21425 | Not Available | Positive | 4622230 - 4623417 | 42509.2 |
| glycoside hydrolase family 28 protein | AMED_RS21430 | Not Available | Positive | 4623651 - 4625108 | 51871.0 |
| hypothetical protein | AMED_RS21435 | Not Available | Negative | 4625152 - 4625367 | 7637.79 |
| acetaldehyde dehydrogenase (acetylating) | AMED_RS21440 | Not Available | Positive | 4625556 - 4626455 | 31397.6 |
| 4-hydroxy-2-oxovalerate aldolase | AMED_RS21445 | Not Available | Positive | 4626452 - 4627507 | 37476.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
