Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antar domain-containing protein | AMED_RS21300 | Not Available | Positive | 4603277 - 4604053 | 27535.0 |
| stas domain-containing protein | AMED_RS21305 | Not Available | Positive | 4604156 - 4604551 | 13658.7 |
| pp2c family protein-serine/threonine phosphatase | AMED_RS21310 | Not Available | Negative | 4604636 - 4606096 | 51807.9 |
| gaf and antar domain-containing protein | AMED_RS21315 | Not Available | Negative | 4606101 - 4606838 | 25333.1 |
| gaf and antar domain-containing protein | AMED_RS21320 | Not Available | Positive | 4606968 - 4607714 | 27212.3 |
| non-homologous end-joining dna ligase | AMED_RS21325 | Not Available | Positive | 4607724 - 4608644 | 33795.5 |
| duf6292 family protein | AMED_RS21330 | Not Available | Positive | 4608919 - 4609338 | 15523.7 |
| class i sam-dependent methyltransferase | AMED_RS21335 | Not Available | Negative | 4609389 - 4610288 | 32520.3 |
| alpha/beta hydrolase | AMED_RS21340 | Not Available | Negative | 4610285 - 4611238 | 33437.0 |
| tetr/acrr family transcriptional regulator | AMED_RS21345 | Not Available | Positive | 4611307 - 4611870 | 19605.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
