Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wxg100 family type vii secretion target | AMED_RS49470 | Not Available | Positive | 4593055 - 4596375 | 106802.0 |
| hypothetical protein | AMED_RS21260 | Not Available | Positive | 4596384 - 4596749 | 13824.9 |
| class i sam-dependent methyltransferase | AMED_RS21265 | Not Available | Negative | 4596733 - 4597527 | 28272.6 |
| hypothetical protein | AMED_RS21270 | Not Available | Positive | 4597735 - 4597923 | 6120.63 |
| hypothetical protein | AMED_RS21275 | Not Available | Positive | 4597923 - 4598099 | 5691.86 |
| hemerythrin domain-containing protein | AMED_RS21280 | Not Available | Positive | 4598159 - 4598713 | 20627.7 |
| hypothetical protein | AMED_RS49475 | Not Available | Positive | 4598716 - 4598847 | 4793.2 |
| non-homologous end-joining dna ligase | AMED_RS21285 | Not Available | Positive | 4598865 - 4600442 | 58637.3 |
| pfkb family carbohydrate kinase | AMED_RS21290 | Not Available | Negative | 4600446 - 4601387 | 32231.4 |
| atp-dependent dna helicase recq | AMED_RS21295 | Not Available | Positive | 4601512 - 4603134 | 57780.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
