Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | AMED_RS02035 | Not Available | Positive | 401504 - 402718 | 42640.6 |
| 4-hydroxybenzoate 3-monooxygenase | AMED_RS02040 | Not Available | Positive | 402828 - 403646 | 30356.0 |
| clp protease n-terminal domain-containing protein | AMED_RS02045 | Not Available | Positive | 403699 - 404436 | 25983.1 |
| nadp-dependent phosphogluconate dehydrogenase | AMED_RS02050 | Not Available | Negative | 404560 - 405999 | 51120.0 |
| mbl fold metallo-hydrolase | AMED_RS02055 | Not Available | Negative | 406085 - 407005 | 32980.9 |
| helix-turn-helix transcriptional regulator | AMED_RS02060 | Not Available | Positive | 407241 - 408104 | 32457.8 |
| sam-dependent methyltransferase | AMED_RS02065 | Not Available | Positive | 408205 - 409056 | 30486.8 |
| sam-dependent methyltransferase | AMED_RS02070 | Not Available | Positive | 409028 - 409876 | 31269.1 |
| class i sam-dependent methyltransferase | AMED_RS02075 | Not Available | Positive | 409873 - 410481 | 21629.8 |
| hypothetical protein | AMED_RS02080 | Not Available | Negative | 410588 - 410842 | 9583.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
