Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS21205 | Not Available | Negative | 4583854 - 4585062 | 40694.4 |
| plp-dependent aminotransferase family protein | AMED_RS21210 | Not Available | Positive | 4585144 - 4586550 | 50264.2 |
| mfs transporter | AMED_RS21215 | Not Available | Negative | 4586654 - 4588054 | 47697.4 |
| srpbcc family protein | AMED_RS21220 | Not Available | Negative | 4588136 - 4588609 | 17661.9 |
| bifunctional nuclease family protein | AMED_RS21225 | Not Available | Positive | 4588770 - 4589285 | 18225.9 |
| sigma-70 family rna polymerase sigma factor | AMED_RS21230 | Not Available | Positive | 4589363 - 4590331 | 35251.3 |
| duf2087 domain-containing protein | AMED_RS21235 | Not Available | Negative | 4590295 - 4590774 | 17344.7 |
| fatty acyl-amp ligase | AMED_RS21240 | Not Available | Positive | 4590845 - 4592485 | 57774.3 |
| acyl carrier protein | AMED_RS21245 | Not Available | Positive | 4592478 - 4592741 | 9302.13 |
| hypothetical protein | AMED_RS21250 | Not Available | Positive | 4592738 - 4593055 | 10368.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
