Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | AMED_RS21155 | Not Available | Positive | 4569613 - 4570644 | 36544.5 |
| m14 family zinc carboxypeptidase | AMED_RS21160 | Not Available | Negative | 4570646 - 4571965 | 46149.6 |
| hypothetical protein | AMED_RS21165 | Not Available | Negative | 4572089 - 4572598 | 19016.8 |
| biotin carboxylase n-terminal domain-containing protein | AMED_RS21170 | Not Available | Negative | 4572656 - 4578133 | 196961.0 |
| hypothetical protein | AMED_RS21175 | Not Available | Negative | 4578382 - 4578621 | 8581.32 |
| duf6345 domain-containing protein | AMED_RS21180 | Not Available | Negative | 4578769 - 4580397 | 57609.9 |
| hypothetical protein | AMED_RS21185 | Not Available | Negative | 4580501 - 4580653 | 4995.92 |
| hypothetical protein | AMED_RS21190 | Not Available | Positive | 4581036 - 4581365 | 10876.3 |
| ceha/mcba family metallohydrolase | AMED_RS21195 | Not Available | Positive | 4581444 - 4582952 | 53675.6 |
| hypothetical protein | AMED_RS21200 | Not Available | Positive | 4583019 - 4583834 | 28218.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
