Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | AMED_RS21105 | Not Available | Negative | 4558220 - 4559245 | 36970.1 |
| nitric oxide synthase oxygenase | AMED_RS21110 | Not Available | Positive | 4559678 - 4560832 | 43348.3 |
| flavodoxin domain-containing protein | AMED_RS21115 | Not Available | Positive | 4560924 - 4561430 | 18182.9 |
| mfs transporter | AMED_RS21120 | Not Available | Positive | 4561510 - 4562790 | 45941.9 |
| exo-alpha-sialidase | AMED_RS21125 | Not Available | Negative | 4562884 - 4564377 | 51074.7 |
| yeih family protein | AMED_RS21130 | Not Available | Negative | 4564491 - 4565459 | 31959.2 |
| lysr family transcriptional regulator | AMED_RS21135 | Not Available | Positive | 4565530 - 4566429 | 31434.2 |
| lysr substrate-binding domain-containing protein | AMED_RS21140 | Not Available | Negative | 4566426 - 4567328 | 33108.6 |
| sdr family oxidoreductase | AMED_RS21145 | Not Available | Positive | 4567451 - 4568335 | 30222.7 |
| padr family transcriptional regulator | AMED_RS21150 | Not Available | Positive | 4568403 - 4569245 | 29472.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
