Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS21055 | Not Available | Negative | 4549454 - 4549786 | 12333.8 |
| mdr family mfs transporter | AMED_RS21060 | Not Available | Negative | 4549840 - 4551348 | 51688.1 |
| duf1015 family protein | AMED_RS21065 | Not Available | Positive | 4551470 - 4552630 | 39643.9 |
| hypothetical protein | AMED_RS21070 | Not Available | Negative | 4552627 - 4553391 | 28307.9 |
| dinb family protein | AMED_RS21075 | Not Available | Negative | 4553391 - 4553897 | 19035.3 |
| atp-dependent dna ligase | AMED_RS21080 | Not Available | Positive | 4553970 - 4555049 | 40411.1 |
| non-homologous end-joining dna ligase | AMED_RS21085 | Not Available | Positive | 4555046 - 4556050 | 36922.0 |
| mfs transporter | AMED_RS21090 | Not Available | Negative | 4556098 - 4557234 | 37454.8 |
| tetr/acrr family transcriptional regulator | AMED_RS21095 | Not Available | Positive | 4557333 - 4557902 | 20633.3 |
| hypothetical protein | AMED_RS21100 | Not Available | Negative | 4557899 - 4558153 | 9098.91 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
