Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS20955 | Not Available | Positive | 4531187 - 4531648 | 16246.0 |
| fkbm family methyltransferase | AMED_RS20960 | Not Available | Positive | 4531746 - 4532537 | 29178.8 |
| glycosyl hydrolase family 65 protein | AMED_RS20965 | Not Available | Negative | 4532534 - 4534570 | 72008.6 |
| hypothetical protein | AMED_RS20970 | Not Available | Negative | 4534961 - 4535254 | 9675.35 |
| apc family permease | AMED_RS20975 | Not Available | Negative | 4535272 - 4537254 | 69936.7 |
| chab family protein | AMED_RS20980 | Not Available | Positive | 4537759 - 4538163 | 14811.2 |
| hypothetical protein | AMED_RS20985 | Not Available | Negative | 4538201 - 4538593 | 14620.2 |
| chemotaxis protein cheb | AMED_RS20990 | Not Available | Positive | 4538751 - 4539341 | 19576.9 |
| chemotaxis protein cheb | AMED_RS20995 | Not Available | Positive | 4539437 - 4540465 | 35627.7 |
| hypothetical protein | AMED_RS21000 | Not Available | Positive | 4540462 - 4541226 | 27706.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
