Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase family 7 protein | AMED_RS20855 | Not Available | Negative | 4504765 - 4505529 | 26652.0 |
| catalase/peroxidase hpi | AMED_RS20860 | Not Available | Negative | 4505709 - 4507982 | 82530.4 |
| fur family transcriptional regulator | AMED_RS20865 | Not Available | Negative | 4507979 - 4508431 | 16326.2 |
| thymidylate synthase | AMED_RS20870 | Not Available | Positive | 4508537 - 4509334 | 29928.4 |
| dihydrofolate reductase | AMED_RS20875 | Not Available | Positive | 4509331 - 4509789 | 16592.7 |
| gmc family oxidoreductase | AMED_RS20880 | Not Available | Positive | 4509969 - 4511594 | 57731.1 |
| succinic semialdehyde dehydrogenase | AMED_RS20885 | Not Available | Positive | 4511591 - 4513165 | 56115.8 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein | AMED_RS20890 | Not Available | Negative | 4513169 - 4514626 | 53752.8 |
| nacht domain-containing ntpase | AMED_RS20895 | Not Available | Positive | 4514713 - 4517976 | 118843.0 |
| pdr/vanb family oxidoreductase | AMED_RS20900 | Not Available | Negative | 4517995 - 4518912 | 32627.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
