Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS20805 | Not Available | Negative | 4492802 - 4493362 | 20100.4 |
| srpbcc family protein | AMED_RS20810 | Not Available | Negative | 4493364 - 4493852 | 18056.1 |
| helix-turn-helix transcriptional regulator | AMED_RS20815 | Not Available | Negative | 4493849 - 4494208 | 13554.1 |
| cellulase family glycosylhydrolase | AMED_RS20820 | Not Available | Negative | 4494322 - 4495719 | 49078.9 |
| nad-dependent epimerase/dehydratase family protein | AMED_RS20825 | Not Available | Positive | 4495912 - 4496751 | 28903.3 |
| spoiie family protein phosphatase | AMED_RS20830 | Not Available | Positive | 4496867 - 4499584 | 96287.1 |
| duf6461 domain-containing protein | AMED_RS20835 | Not Available | Positive | 4499603 - 4501246 | 57490.9 |
| alpha/beta fold hydrolase | AMED_RS20840 | Not Available | Negative | 4501230 - 4502933 | 60259.9 |
| hypothetical protein | AMED_RS20845 | Not Available | Negative | 4503058 - 4503576 | 18449.2 |
| llm class flavin-dependent oxidoreductase | AMED_RS20850 | Not Available | Positive | 4503705 - 4504727 | 37612.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
