Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | AMED_RS20755 | Not Available | Negative | 4481556 - 4482371 | 29081.1 |
| carbohydrate abc transporter permease | AMED_RS20760 | Not Available | Negative | 4482416 - 4483357 | 33545.6 |
| abc transporter substrate-binding protein | AMED_RS20765 | Not Available | Negative | 4483370 - 4484716 | 47280.1 |
| hypothetical protein | AMED_RS20770 | Not Available | Negative | 4484754 - 4485095 | 11482.9 |
| laci family dna-binding transcriptional regulator | AMED_RS20775 | Not Available | Negative | 4485231 - 4486229 | 34996.8 |
| tetr/acrr family transcriptional regulator | AMED_RS20780 | Not Available | Negative | 4486263 - 4486862 | 21492.7 |
| duf1330 domain-containing protein | AMED_RS20785 | Not Available | Positive | 4486941 - 4487309 | 13572.2 |
| alpha/beta fold hydrolase | AMED_RS20790 | Not Available | Positive | 4487309 - 4488061 | 26286.1 |
| cellulose binding domain-containing protein | AMED_RS20795 | Not Available | Negative | 4488065 - 4489393 | 45770.2 |
| mgh1-like glycoside hydrolase domain-containing protein | AMED_RS20800 | Not Available | Negative | 4489513 - 4492611 | 111679.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
