Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylamine n-acetyltransferase | AMED_RS01985 | Not Available | Positive | 392099 - 392890 | 29243.8 |
| eal domain-containing protein | AMED_RS01990 | Not Available | Negative | 392884 - 395205 | 83349.7 |
| rhomboid-like protein | AMED_RS01995 | Not Available | Negative | 395271 - 395996 | 26329.4 |
| hypothetical protein | AMED_RS02000 | Not Available | Positive | 396166 - 396726 | 18344.3 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS02005 | Not Available | Negative | 396727 - 397173 | 16385.5 |
| tetr/acrr family transcriptional regulator | AMED_RS02010 | Not Available | Positive | 397261 - 397836 | 20739.9 |
| nucleobase:cation symporter-2 family protein | AMED_RS02015 | Not Available | Negative | 397787 - 399118 | 45418.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | AMED_RS02020 | Not Available | Positive | 399203 - 400342 | 42031.5 |
| nipsnap family protein | AMED_RS02025 | Not Available | Positive | 400342 - 400662 | 12197.4 |
| iclr family transcriptional regulator | AMED_RS02030 | Not Available | Positive | 400659 - 401450 | 27901.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
