Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene desaturase family protein | AMED_RS20705 | Not Available | Negative | 4470159 - 4471634 | 51898.1 |
| polyprenyl synthetase family protein | AMED_RS20710 | Not Available | Negative | 4471631 - 4472734 | 39542.1 |
| carotenoid biosynthesis protein | AMED_RS20715 | Not Available | Positive | 4473105 - 4473923 | 28466.0 |
| glycosyltransferase family 2 protein | AMED_RS20720 | Not Available | Positive | 4473902 - 4475002 | 38080.6 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS20725 | Not Available | Positive | 4474999 - 4476510 | 53374.8 |
| cdp-alcohol phosphatidyltransferase family protein | AMED_RS20730 | Not Available | Negative | 4476716 - 4477363 | 21859.7 |
| yhjd/yihy/brkb family envelope integrity protein | AMED_RS20735 | Not Available | Positive | 4477415 - 4478290 | 30397.5 |
| merr family transcriptional regulator | AMED_RS20740 | Not Available | Positive | 4478406 - 4479293 | 31200.9 |
| merr family transcriptional regulator | AMED_RS20745 | Not Available | Positive | 4479513 - 4480403 | 32192.6 |
| duf5914 domain-containing protein | AMED_RS20750 | Not Available | Positive | 4480512 - 4481522 | 36557.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
