Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-ribosomal peptide synthetase | AMED_RS20655 | Not Available | Positive | 4448722 - 4456410 | 274434.0 |
| condensation domain-containing protein | AMED_RS20660 | Not Available | Positive | 4456424 - 4461820 | 190019.0 |
| 3-oxoacyl-acp synthase | AMED_RS20665 | Not Available | Positive | 4461817 - 4462803 | 34756.5 |
| calx-beta domain-containing protein | AMED_RS20670 | Not Available | Negative | 4462848 - 4464722 | 61987.7 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS20675 | Not Available | Negative | 4465031 - 4466269 | 44103.0 |
| fad-dependent oxidoreductase | AMED_RS20680 | Not Available | Negative | 4466275 - 4467816 | 55350.0 |
| class i sam-dependent methyltransferase | AMED_RS20685 | Not Available | Negative | 4467813 - 4468544 | 26057.0 |
| lycopene cyclase domain-containing protein | AMED_RS20690 | Not Available | Negative | 4468541 - 4468861 | 11975.8 |
| lycopene cyclase domain-containing protein | AMED_RS20695 | Not Available | Negative | 4468858 - 4469199 | 12499.7 |
| phytoene/squalene synthase family protein | AMED_RS20700 | Not Available | Negative | 4469200 - 4470162 | 34858.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
