Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| afsr/sarp family transcriptional regulator | AMED_RS20555 | Not Available | Negative | 4429717 - 4430451 | 27330.9 |
| f-type h+-transporting atpase subunit c | AMED_RS20560 | Not Available | Positive | 4431614 - 4431859 | 8236.18 |
| 2'-5' rna ligase family protein | AMED_RS20565 | Not Available | Positive | 4431947 - 4432486 | 19030.7 |
| hypothetical protein | AMED_RS20570 | Not Available | Negative | 4432483 - 4433985 | 53842.2 |
| paax family transcriptional regulator c-terminal domain-containing protein | AMED_RS20575 | Not Available | Negative | 4434062 - 4434634 | 21615.7 |
| hypothetical protein | AMED_RS48740 | Not Available | Positive | 4434639 - 4435034 | 14560.0 |
| phb depolymerase family esterase | AMED_RS20585 | Not Available | Positive | 4435095 - 4436030 | 32455.2 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS20590 | Not Available | Negative | 4436087 - 4437196 | 38345.4 |
| response regulator transcription factor | AMED_RS20595 | Not Available | Negative | 4437193 - 4437849 | 23474.4 |
| serine hydrolase | AMED_RS20600 | Not Available | Positive | 4437937 - 4439106 | 40797.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
