Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | AMED_RS20410 | Not Available | Positive | 4388838 - 4389638 | 28763.0 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS20415 | Not Available | Positive | 4389643 - 4390437 | 26399.4 |
| hypothetical protein | AMED_RS48000 | Not Available | Positive | 4390558 - 4390719 | 5727.59 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS20420 | Not Available | Negative | 4390688 - 4391428 | 25011.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS20425 | Not Available | Positive | 4391492 - 4391941 | 16437.7 |
| btad domain-containing putative transcriptional regulator | AMED_RS20430 | Not Available | Positive | 4392076 - 4395180 | 111177.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii c-terminal domain-containing protein | AMED_RS20435 | Not Available | Positive | 4395325 - 4396251 | 32352.8 |
| type iii plp-dependent enzyme | AMED_RS20440 | Not Available | Positive | 4396262 - 4397557 | 47018.6 |
| hypothetical protein | AMED_RS20445 | Not Available | Positive | 4397561 - 4398370 | 28580.3 |
| response regulator transcription factor | AMED_RS20450 | Not Available | Positive | 4398426 - 4399070 | 23945.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
