Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | AMED_RS20365 | Not Available | Positive | 4377548 - 4377805 | 9157.77 |
| beta-ketoacyl synthase | AMED_RS20370 | Not Available | Positive | 4377802 - 4379049 | 42379.6 |
| 3-oxoacyl-acp synthase iii family protein | AMED_RS20375 | Not Available | Positive | 4379063 - 4380073 | 34858.6 |
| glycosyltransferase | AMED_RS20380 | Not Available | Positive | 4380070 - 4380828 | 28211.5 |
| cytochrome p450 | AMED_RS20385 | Not Available | Positive | 4380825 - 4382006 | 41696.9 |
| class i adenylate-forming enzyme family protein | AMED_RS20390 | Not Available | Positive | 4382003 - 4383541 | 54080.0 |
| nad(p)-dependent oxidoreductase | AMED_RS20395 | Not Available | Positive | 4383538 - 4384434 | 31427.7 |
| metal-dependent hydrolase | AMED_RS48735 | Not Available | Positive | 4384485 - 4384701 | 8313.14 |
| btad domain-containing putative transcriptional regulator | AMED_RS20400 | Not Available | Positive | 4384996 - 4387704 | 97441.6 |
| lysr family transcriptional regulator | AMED_RS20405 | Not Available | Negative | 4387738 - 4388703 | 35942.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
