Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | AMED_RS20315 | Not Available | Positive | 4361152 - 4361739 | 21545.9 |
| long-chain fatty acid--coa ligase | AMED_RS20320 | Not Available | Positive | 4361941 - 4363554 | 57710.3 |
| gaf domain-containing protein | AMED_RS20325 | Not Available | Negative | 4363561 - 4365249 | 60117.5 |
| mfs transporter | AMED_RS20330 | Not Available | Positive | 4365395 - 4366798 | 49030.4 |
| tannase/feruloyl esterase family alpha/beta hydrolase | AMED_RS20335 | Not Available | Positive | 4366795 - 4368399 | 56504.9 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | AMED_RS20340 | Not Available | Negative | 4368445 - 4372101 | 126394.0 |
| hypothetical protein | AMED_RS20345 | Not Available | Negative | 4372391 - 4372735 | 12346.6 |
| glycosyltransferase family 39 protein | AMED_RS20350 | Not Available | Negative | 4372830 - 4374554 | 60724.5 |
| endo-1,4-beta-xylanase | AMED_RS20355 | Not Available | Positive | 4374744 - 4376132 | 49239.9 |
| cdar family transcriptional regulator | AMED_RS20360 | Not Available | Negative | 4376172 - 4377374 | 44474.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
