Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS01935 | Not Available | Negative | 384772 - 384975 | 6727.43 |
| helix-turn-helix domain-containing protein | AMED_RS01940 | Not Available | Positive | 385148 - 385897 | 27796.2 |
| nudix hydrolase | AMED_RS01945 | Not Available | Positive | 385903 - 386379 | 17809.0 |
| hd domain-containing protein | AMED_RS01950 | Not Available | Negative | 386371 - 386943 | 20809.5 |
| gnat family n-acetyltransferase | AMED_RS01955 | Not Available | Negative | 387030 - 387659 | 23880.3 |
| hypothetical protein | AMED_RS01960 | Not Available | Positive | 387980 - 388507 | 18201.8 |
| hypothetical protein | AMED_RS01965 | Not Available | Positive | 389270 - 389455 | 6277.27 |
| hypothetical protein | AMED_RS01970 | Not Available | Negative | 389523 - 390044 | 18752.9 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AMED_RS01975 | Not Available | Positive | 390984 - 391571 | 20932.1 |
| ycii family protein | AMED_RS01980 | Not Available | Positive | 391715 - 392065 | 12703.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
