Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | AMED_RS20220 | Not Available | Positive | 4335803 - 4336870 | 36843.8 |
| gfo/idh/moca family protein | AMED_RS20225 | Not Available | Positive | 4336901 - 4338046 | 41024.5 |
| sugar phosphate isomerase/epimerase | AMED_RS20230 | Not Available | Positive | 4338043 - 4339047 | 37729.0 |
| zinc-binding dehydrogenase | AMED_RS20235 | Not Available | Negative | 4339077 - 4340027 | 31391.6 |
| tetr/acrr family transcriptional regulator | AMED_RS20240 | Not Available | Positive | 4340114 - 4340701 | 21400.8 |
| alpha/beta hydrolase | AMED_RS20245 | Not Available | Positive | 4340757 - 4341494 | 26352.9 |
| tetr/acrr family transcriptional regulator | AMED_RS20250 | Not Available | Positive | 4341491 - 4342072 | 20409.4 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | AMED_RS20255 | Not Available | Negative | 4342079 - 4344928 | 101686.0 |
| ricin domain-containing protein | AMED_RS20260 | Not Available | Negative | 4344946 - 4346307 | 46602.0 |
| dihydrofolate reductase family protein | AMED_RS20265 | Not Available | Negative | 4346478 - 4347038 | 20691.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
