Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS48405 | Not Available | Negative | 4327542 - 4327820 | 10105.2 |
| rna polymerase sigma factor | AMED_RS48730 | Not Available | Negative | 4327994 - 4328200 | 6945.49 |
| alpha/beta fold hydrolase | AMED_RS20180 | Not Available | Positive | 4328392 - 4329177 | 27945.3 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS20185 | Not Available | Negative | 4329201 - 4329689 | 17840.6 |
| fad-dependent monooxygenase | AMED_RS20190 | Not Available | Positive | 4329799 - 4330983 | 42920.8 |
| hypothetical protein | AMED_RS48255 | Not Available | Negative | 4331026 - 4331223 | 6537.02 |
| rok family transcriptional regulator | AMED_RS20200 | Not Available | Positive | 4331395 - 4332597 | 40909.3 |
| rok family protein | AMED_RS20205 | Not Available | Positive | 4332822 - 4333301 | 15708.0 |
| sugar abc transporter atp-binding protein | AMED_RS20210 | Not Available | Positive | 4333298 - 4334797 | 53066.2 |
| abc transporter permease | AMED_RS20215 | Not Available | Positive | 4334794 - 4335792 | 34733.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
